Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925144.1_cds_XP_016473425.1_65555
CDS Infomation

[gene=LOC107795324] [db_xref=GeneID:107795324] [protein=ribosomal RNA small subunit methyltransferase, mitochondrial-like] [protein_id=XP_016473425.1] [location=join(120707..121105,121524..122285)] [gbkey=CDS]
Sequence

ATGCTTCATCGTACCAAAATTCTCTCCGAAAACATTTCCAAACTAAACCTTAGCAAACAT
TTCCTCCGGCAACATTGTCGCACGAAGTCGACTCGCCGTTTCAACAACGCCAAAGATGAA
GATGAAGATTATCACGGAGTCCGAAGAAAAACTGAAATTTATTTGCTAAAAAGCAGAGGT
CAACACCTGCTCATGAATCCCAGAGTTCTTAATTCCATTGTCCAAAAGTCCAACATACTT
CCTACTGATACCGTTCTAGAAATTGGACCCGGCACTGGAAATCTTACCCTGAAGCTTCTA
GAAGTTGCCGAAAAAGTCATAGCCATCGAAATTGACAAACGTATGGTTGAGATTCTTCAC
AAGCGCGTCTCTGAGCGAGGGCTTCAGGACCGCTTAACTGTTATATGTCAAGATGCTTTA
AAGACCGAGTTTCCAGAGTTTGATCTTTTGGTAGCCAACATCCCTTATGGAATTTCTTCT
CCTTTGGTTGCTAAATTGGTTTTTGGGAAAAACCCATATAGGAGTGGGACGCTACTTCTT
CAGAAAGAGTTTGCAAGGAGGCTATTGGCAAATCCAGGGGACTCTGAGTTTAATAGATTA
GCTGTGAACGTGAAGCTGGTGGCTGATGTAGAGTTTGTCATGAATGTGAGCAAGAAGGAC
TTTTTGCCGTGTCCAAAAGTTGATTCTGCTGTTGTGAAGATACATCCTAAAGCTGAAATT
CCAGAGTTGGACTATCAAGAATGGTGTGCATTTACAAGAACCTGCTTCACCAAGAAAAAT
AAAACATTAGGTGCGATCTTTAAGCAGAAAAGAATGTTACTGGAGTTAATGAAGCTGCAA
GAAATCAAACTGGATGAAGTGAATAACGCAATTTACAGTGATTATCATGTTAATGATTCA
GAAGATGAAGATGGGCTGCACAATGAAGATAATGCTAATGTCTCTTCTGATGTCGGAATG
GACCTGAACTTGTTCAGAGAGAAAGTCATTGACATTCTACGATCTGGTGGATTCGAAGAT
AAGAGGCCTTCAAAGCTCTCCCATGAGGAGCTACTGAACTTACTTTCTTTGTTCAATCGA
GCTAGGTTGCACTTTCACGGTCAAGTAAAACCCACGAATGGAAAGGATGCAGAACTTGCT
TCTGCATTTGGTCCATTATAA

Peptide Sequence

PEP ID

XP_016473425.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase, mitochondrial-like [Nicotiana tabacum]
Sequence

MLHRTKILSENISKLNLSKHFLRQHCRTKSTRRFNNAKDEDEDYHGVRRKTEIYLLKSRG
QHLLMNPRVLNSIVQKSNILPTDTVLEIGPGTGNLTLKLLEVAEKVIAIEIDKRMVEILH
KRVSERGLQDRLTVICQDALKTEFPEFDLLVANIPYGISSPLVAKLVFGKNPYRSGTLLL
QKEFARRLLANPGDSEFNRLAVNVKLVADVEFVMNVSKKDFLPCPKVDSAVVKIHPKAEI
PELDYQEWCAFTRTCFTKKNKTLGAIFKQKRMLLELMKLQEIKLDEVNNAIYSDYHVNDS
EDEDGLHNEDNANVSSDVGMDLNLFREKVIDILRSGGFEDKRPSKLSHEELLNLLSLFNR
ARLHFHGQVKPTNGKDAELASAFGPL

Transcript Sequence

Gene sequence data has not been registered.